Junior B.
b731478f5d
Set up the project skeleton per PLAN.md §4: - src/ package: identifiers, disease, drugs, scoring, provenance with pydantic schemas and confidence-tier logic (working); data-pull/compute functions stubbed per their build week - 5 starter notebooks (01-05) with PLAN-referenced steps - tests/test_scoring.py: tier-assignment tests pass; scoring reference test xfail until Week 3 - docs/: recovery_test_report, data_sources, known_limitations skeletons - pyproject.toml (requires-python >=3.11,<3.14), .gitignore, README - data/ tree preserved via .gitkeep; raw/processed/results gitignored Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
34 lines
501 B
Plaintext
34 lines
501 B
Plaintext
# Data — never commit raw or processed data; keep directory structure via .gitkeep.
|
|
# Re-include directories first (!data/**/), else .gitkeep inside an excluded dir
|
|
# cannot be un-ignored.
|
|
data/raw/**
|
|
data/processed/**
|
|
data/results/**
|
|
!data/**/
|
|
!data/**/.gitkeep
|
|
|
|
# Python
|
|
__pycache__/
|
|
*.py[cod]
|
|
*.egg-info/
|
|
.eggs/
|
|
build/
|
|
dist/
|
|
.venv/
|
|
venv/
|
|
env/
|
|
|
|
# Jupyter
|
|
.ipynb_checkpoints/
|
|
*/.ipynb_checkpoints/
|
|
|
|
# Tooling caches
|
|
.pytest_cache/
|
|
.ruff_cache/
|
|
.mypy_cache/
|
|
|
|
# OS / editor
|
|
.DS_Store
|
|
.idea/
|
|
.vscode/
|